Insertion junction: CLIP2.008464_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008464
Chromosome:chromosome 6
Location:4859319
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280350 (1 of 5) IPR001680//IPR011047//IPR017986//IPR020472 - WD40 repeat // Quinonprotein alcohol dehydrogenase-like superfamily // WD40-repeat-containing domain // G-protein beta WD-40 repeat 3'UTR
Cre06.g280385 PAP6 predicted protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCTATGACATGTCAGGGCCGCCGCCGCTGCCGCCGCCAGACCAGCAGC
Internal bar code:GTTCAAGTTCGGGTTTACTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1515
LEAP-Seq percent confirming:91.1111
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTCTCCCTCACCCTCACC
Suggested primer 2:CGACACAACCTACCTGCTGT