Insertion junction: CLIP2.008465_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.008465
Chromosome:chromosome 10
Location:4898999
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g453707 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTACGGTAATGAGGCAATGTGACTGAGTCTCTCACTGCCGCAGGCGCTG
Internal bar code:GCGTCTTTGCGCCCATAGTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1717
LEAP-Seq percent confirming:90.3226
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAACCCAAACAAACCGCC
Suggested primer 2:GGGGCAGTAAGCTGGACTTT