Insertion junction: CLIP2.008469_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008469
Chromosome:chromosome 6
Location:8777436
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g311050 (1 of 1) K00167 - 2-oxoisovalerate dehydrogenase E1 component beta subunit (BCKDHB, bkdA2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCATGAATGTAACGCCCCCCCCCCCCCGCCCAACCACCACACACCCACA
Internal bar code:TGCAGGTCTGGGAAAGGCAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:334
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTAGTCGCCCTGTGTGTG
Suggested primer 2:GAACACGCTGCTGGCATATG