Insertion junction: CLIP2.008471_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.008471
Chromosome:chromosome 17
Location:4385104
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g730550 (1 of 3) PTHR22298:SF39 - ENDOGLUCANASE 7 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGTAGTTAGCTGCGCAGCTGCTGCTGCGGTGGTGCGGCTTCTCGGGAG
Internal bar code:GGGAATGAATTGAACAGATTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:5597
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:152
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:152

Suggested primers for confirmation by PCR

Suggested primer 1:CTGACGTGGCTGTTGTGTTG
Suggested primer 2:CCCTAGTGGAAGCCATAGCG