Insertion junction: CLIP2.008472_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.008472
Chromosome:chromosome 16
Location:7967251
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691440 FAP43 Flagellar Associated Protein 43; (1 of 2) PTHR14885//PTHR14885:SF1 - UNCHARACTERIZED // WD REPEAT-CONTAINING PROTEIN 96 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCCAGACAGGTTGTGCAGCGGGTCGGAATGGCCGGCGGCGGCAGCGGC
Internal bar code:GCATTTTTTATATGCCCCCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1261
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGTAATGCTAGCGGCCAG
Suggested primer 2:CACCACGCTGTTGAGAGACT