Insertion junction: CLIP2.008477_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008477
Chromosome:chromosome 9
Location:1940985
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397100 (1 of 39) IPR009003 - Peptidase S1, PA clan intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAGAACATGGTCTTGCGTATGACTGAATACATGCAACAGTGTAGACCT
Internal bar code:TCTTGTGTATGGGGGTTTACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1971
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GAACAACTCACCGCTGGAGA
Suggested primer 2:GGGACATTGGGGAGGAACTG