Insertion junction: CLIP2.008479_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008479
Chromosome:chromosome 1
Location:4242613
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g028650 (1 of 726) IPR011009 - Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTTGTTCGCGCATGCAGGGGCGAGGACGGTGGTCATCCGGCCCCTAA
Internal bar code:GGTTCATAAGGCGCTTCGCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1543
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GATGGGTGAGTGGGTTGGAG
Suggested primer 2:ACCCATCAGTGCTTAAGGGC