Insertion junction: CLIP2.008480_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008480
Chromosome:chromosome 9
Location:2200029
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395300 (1 of 1) PTHR11736//PTHR11736:SF14 - MELANOMA-ASSOCIATED ANTIGEN MAGE ANTIGEN // MAGE PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCAACCCATGCCCACGAGCAGACCAAGCAGGAGCTGGCTCGCGTCGT
Internal bar code:AGTCCTCAAAAGCTGCATGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1330
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AGTAAGGAGCAACAGCCACC
Suggested primer 2:AGAGATGGTGCCAGGGTTTG