Insertion junction: CLIP2.008485_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008485
Chromosome:chromosome 16
Location:7021920
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673841 (1 of 1) PTHR13481:SF0 - UPF0454 PROTEIN C12ORF49 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTATACCCCGCGGCCTCCACCAGGTGGTGGTCCGCGGTCCCGGCTGCCC
Internal bar code:TGCGGAGGAGCGGGTATATCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:743
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCGAGCGCGATTCAAGAAAG
Suggested primer 2:CCAGAATCCGCTGTCCTTGT