Insertion junction: CLIP2.008492_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008492
Chromosome:chromosome 1
Location:7694487
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g054100 (1 of 21) IPR001611//IPR003591 - Leucine-rich repeat // Leucine-rich repeat, typical subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTCAGAACAGCTTGAGCAAAAGCGTTGTTGGGGTCAGGGACGTACACC
Internal bar code:GTAGAGCCATGAGCGGCACAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1286
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTCCTCCAACCTGTGAG
Suggested primer 2:CTGCCCTTGTGCTCACTACA