Insertion junction: CLIP2.008492_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.008492
Chromosome:chromosome 1
Location:7694501
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g054100 (1 of 21) IPR001611//IPR003591 - Leucine-rich repeat // Leucine-rich repeat, typical subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGTTGCGTTTTCTTGCTTACTCTCTACCACACCTACAGACGCACTCGC
Internal bar code:GTAGAGCCATGAGCGGCACAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2175
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCCTTGTGCTCACTACA
Suggested primer 2:CAGCTCCTCCAACCTGTGAG