Insertion junction: CLIP2.008494_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.008494
Chromosome:chromosome 11
Location:812184
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467637 (1 of 1) IPR009057//IPR009060//IPR015940 - Homeodomain-like // UBA-like // Ubiquitin-associated domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCTTAGCTTGCCGCGTATGGCCAAGCCCAGCTTCAGCAACAGGGTTAC
Internal bar code:GTGGGGGGCATAAAGAGAATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:5166
LEAP-Seq percent confirming:94.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:AACTACTGCAAGCCCCCTTC
Suggested primer 2:ATAGACAGCTACGCGGCATC