Insertion junction: CLIP2.008498_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008498
Chromosome:chromosome 5
Location:332343
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g243452 (1 of 6) PTHR31942//PTHR31942:SF1 - FAMILY NOT NAMED // MLO-LIKE PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCATGATTGTAACCCCCCATCCCGCTGCCCACCTGGATGATGGCGCGAG
Internal bar code:TGCGTCCCGTAACTAAAGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:724
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CCTAACCCCCATCCCTCTCA
Suggested primer 2:ACCTCAGCTCCAGACTGCTA