Insertion junction: CLIP2.008498_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008498
Chromosome:chromosome 5
Location:332344
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g243452 (1 of 6) PTHR31942//PTHR31942:SF1 - FAMILY NOT NAMED // MLO-LIKE PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTAAGAAGAGGGGCGGGGGAGCGAGGCGGCGCGAGGTATGCGTGTGCG
Internal bar code:TGCGTCCCGTAACTAAAGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:889
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCAGCTCCAGACTGCTA
Suggested primer 2:CCTAACCCCCATCCCTCTCA