Insertion junction: CLIP2.008501_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008501
Chromosome:chromosome 8
Location:2220389
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g370200 (1 of 5) IPR001214//IPR003616 - SET domain // Post-SET domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTTGCCTACAGCACATGACCGGGTGGACTGCTGGCCCCTCCACTGCTGC
Internal bar code:GCAACACTTACGCTATCGATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:576
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACACAACCAACATGTCC
Suggested primer 2:AGCCGTTTGCAGCAAAGATG