Insertion junction: CLIP2.008501_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008501
Chromosome:chromosome 8
Location:2220390
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g370200 (1 of 5) IPR001214//IPR003616 - SET domain // Post-SET domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCATGTCGGGCGAAACGCCCGCGCCAACCCACCTTCCCCATACCACC
Internal bar code:GCAACACTTACGCTATCGATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:889
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCGTTTGCAGCAAAGATG
Suggested primer 2:GCCACACAACCAACATGTCC