Insertion junction: CLIP2.008506_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.008506
Chromosome:chromosome 1
Location:7151989
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g051211 MAE9 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF); MATE efflux family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCACGTCGCGAGAGAGGATGTTGTTCCCCATGCCACCCAAAAGCCAAA
Internal bar code:GTTTGCTCGTGTGTTTTGGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:3803
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:CACACAGCACACACCATTGG
Suggested primer 2:GCATGAACACGCACACACAT