Insertion junction: CLIP2.008506_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008506
Chromosome:chromosome 1
Location:7151996
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g051211 MAE9 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF); MATE efflux family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGATGCCTGATGCCCAGCCGCATGCACTGCCACACGCAACCCCCCTC
Internal bar code:CATGAGGTGTAGGGCGAGGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2640
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGAACACGCACACACAT
Suggested primer 2:CACACAGCACACACCATTGG