Insertion junction: CLIP2.008513_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.008513
Chromosome:chromosome 16
Location:3910396
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g689250 GTR23 (1 of 1) PF04564//PF06701 - U-box domain (U-box) // Mib_herc2 (MIB_HERC2); Putative ubiquitin-protein ligase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCCGGTACGGCGAGGCGTGTGAGCCCTGATCAATCGCGTCAAACCGC
Internal bar code:AGCTCAGCCTCGGAAAGCGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2160
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTATACGGTCTTCCCACG
Suggested primer 2:TGTCGAGCTTACGTTGCCTT