Insertion junction: CLIP2.008517_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008517
Chromosome:chromosome 7
Location:1032359
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319650 FXL4,FXL5 FixL-like PAS domain protein; (1 of 3) IPR000014//IPR013767 - PAS domain // PAS fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCCTTCCTGCTCCATCCATCAGGGTCATCGCCTCGTCAGACCTCAAC
Internal bar code:TCTGCCGGTTAGATTTTTGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4012
LEAP-Seq percent confirming:95.5556
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:TCACGTGCCATGTACGAACA
Suggested primer 2:GCCAACTGCAACTTCACCAG