Insertion junction: CLIP2.008518_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.008518
Chromosome:chromosome 14
Location:459240
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g610801 CDS
lncRNA_TCONS_00189579 CDS
lncRNA_TCONS_00189580 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCGCGACCACCTGCGAGGCACATCGATGGTACATTCGACGGAACAGGG
Internal bar code:TCTAGTGTGACAATTACGAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2064
LEAP-Seq percent confirming:98.9583
LEAP-Seq n confirming:95
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:AACTACAAAGCGGACGACGT
Suggested primer 2:GCACGATACACAGCAGCATG