Insertion junction: CLIP2.008520_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008520
Chromosome:chromosome 9
Location:4791300
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402478 (1 of 107) PF00069//PF07714 - Protein kinase domain (Pkinase) // Protein tyrosine kinase (Pkinase_Tyr) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAACCAATGCCGTAAGGAAACAGTCGCGCTGCAAAGAGAAGCTGCAGC
Internal bar code:CACGCACAGCTAAGGTGCGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:459
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCACACCTACCTGTGTC
Suggested primer 2:ATGAGGGTGGCAAGGATGTG