Insertion junction: CLIP2.008525_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.008525
Chromosome:chromosome 9
Location:5170458
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g406650 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCCCCGCTGCCTGCCGCTCCTCCGCCTCCGCCTCGTCCTCCGCTGCCT
Internal bar code:TGCATGATCTTTACCGACATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:939
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGCCTGGATGAGGTCTAT
Suggested primer 2:GTAGCCAAGCCAGCAAAAGC