Insertion junction: CLIP2.008525_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008525
Chromosome:chromosome 9
Location:5170459
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g406650 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGCACACAAGGAAGCGGCGGAGGCAGAAGAGAAGGGGAAGGCCGGAG
Internal bar code:TGCATGATCTTTACCGACATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:315
LEAP-Seq percent confirming:5.88235
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGCCAAGCCAGCAAAAGC
Suggested primer 2:ACGGCCTGGATGAGGTCTAT