Insertion junction: CLIP2.008536_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008536
Chromosome:chromosome 3
Location:8083852
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201150 (1 of 2) 2.5.1.117 - Homogentisate solanesyltransferase / HST 3'UTR
Cre03.g201200 FAP283 Flagellar Associated Protein 283 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGAACAAATTCGTAGTCAATACCTGTAACTCCAAAAGCAGTTCCTGCC
Internal bar code:GGTATTGAGCTTCGTTATCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1741
LEAP-Seq percent confirming:98.6667
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGAGTTACTGGTGGCTGT
Suggested primer 2:ATGTAAACGGATGGCCCTGG