Insertion junction: CLIP2.008540_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.008540
Chromosome:chromosome 1
Location:5500177
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g039050 (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACTATGGTGCTGCTGGCAGCTCTGGGTCAGCCCATGGCTTGACGCTGG
Internal bar code:AGGGGGCTATGTTGGGTTGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1347
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTAGTTGCTCCGAGTGG
Suggested primer 2:GTTCTCGACCTGACGCTGAA