Insertion junction: CLIP2.008541_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008541
Chromosome:chromosome 12
Location:2513002
Confidence (%):63
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00076030

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATATCACGACAACGCACGGTCACACGCCAGGTCATGCTGGCACACGCTT
Internal bar code:GGGTAGGGGGGTGCAGGCCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1892
LEAP-Seq percent confirming:6.18557
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:91
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTCGCATTTTCTTTGGCA
Suggested primer 2:CCGGGTCGTTCTTGTAACCA