Insertion junction: CLIP2.008546_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008546
Chromosome:chromosome 5
Location:921851
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g246600 (1 of 1) IPR001781//IPR027377 - Zinc finger, LIM-type // Zinc-binding domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCCGCATGAGCTCGTCGACTTTGTCACTCCCGGGCCACAACTTGGCC
Internal bar code:GCCGCCCAATTCCCAGACCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:517
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTTCGGCATGTCGTGTTT
Suggested primer 2:CGATGGTCCCGGACATACTG