Insertion junction: CLIP2.008546_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008546
Chromosome:chromosome 5
Location:921892
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g246600 (1 of 1) IPR001781//IPR027377 - Zinc finger, LIM-type // Zinc-binding domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGTGTGGCGACATGACATAACATGTATGCCGGGTCATTACGGGTTCA
Internal bar code:GCCGCCCAATTCCCAGACCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3716
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:CGATGGTCCCGGACATACTG
Suggested primer 2:GCTTTCGGCATGTCGTGTTT