Insertion junction: CLIP2.008557_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.008557
Chromosome:chromosome 14
Location:1523428
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g617800 (1 of 3) PTHR12385:SF44 - PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGAAGGACACAAGCGCCCGACGACCCGACCCACCAGAGCGAGTAGGTC
Internal bar code:GACGTTGCGGTATTATTTCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2136
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATCCTCAACTGCGTGAT
Suggested primer 2:CCAGTCTTAACCACCGCCAT