Insertion junction: CLIP2.008558_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008558
Chromosome:chromosome 2
Location:4801264
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g109000 (1 of 2) PF03254 - Xyloglucan fucosyltransferase (XG_FTase) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTGCGCAGCCTCCTCCTCCTCGTCCTCCGAGACTGCCTGCCCCTGGC
Internal bar code:TTGGGAAGTTAGCGATATGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1186
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTCGTCATCATCGTCGTC
Suggested primer 2:ACTTAGCCATGCCAGACCAC