Insertion junction: CLIP2.008561_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.008561
Chromosome:chromosome 12
Location:4604793
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g521851 (1 of 3) PF04982 - HPP family (HPP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCTCACCCCCTCCAGACCCCACCTCTTGAGCCCGTACCCTGCACCAC
Internal bar code:ACACAGCACGCGTCTCTCCCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:971
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ACGACAAAGACGTCCTTCCC
Suggested primer 2:ACAGCATTGTCGGAGTGGAG