Insertion junction: CLIP2.008572_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008572
Chromosome:chromosome 9
Location:2400144
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393750 (1 of 1) PTHR24031:SF284 - DEAD-BOX HELICASE DBP80 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGCTGCTGCTGCTGCCAACGCTGCCGGCGCTGCAACGGCCAGCTCCG
Internal bar code:TAGCCATTAAGTTGGCATAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1862
LEAP-Seq percent confirming:68.75
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AATCCAATACCCGCAGCACA
Suggested primer 2:CGCTGTCTCCGAAGCCATAT