Insertion junction: CLIP2.008574_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.008574
Chromosome:chromosome 12
Location:7637387
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g555600 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCCGGCTGCAGGTGCAGGGGCCTCGCCAATGTCGGGCCGCGTCTGTG
Internal bar code:GCCTATCCGTAGCGTTACGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:654
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCGATTTGCCTTCGCCAG
Suggested primer 2:TTCAACGTGCCAGGGTACTC