Insertion junction: CLIP2.008574_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.008574
Chromosome:chromosome 16
Location:7206549
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676981 (1 of 8) IPR008962 - PapD-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCCAAATCCTTCTCTCTTGCAAGCGCTGGACTTAACTTCATGCATAC
Internal bar code:GGGTTTTATATAAGATGGCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2817
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:TATGGTTCACAACGACCCGG
Suggested primer 2:GTCATTGCGCCTTTGTGGTT