Insertion junction: CLIP2.008580_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.008580
Chromosome:chromosome 16
Location:3083134
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g664500 ARL6,BBS3B,ARFA1aBBS3B,BBS3 (1 of 2) K07951 - ADP-ribosylation factor-like protein 6 (ARL6, BBS3); Bardet-Biedl syndrome-3 associated protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGACAGGTGACAGTCTCATTCACACGATTGCTTGGCATAGGGCTTCAT
Internal bar code:TGAGGATAGGAACGAGGGTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1914
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAACCCTGACAGCTTGC
Suggested primer 2:GAATAGCGGAGGTACAGGGC