Insertion junction: CLIP2.008583_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.008583
Chromosome:chromosome 15
Location:1794043
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g141606 DHC9 (1 of 1) IPR004273//IPR013602//IPR024317//IPR024743//IPR026983//IPR027417 - Dynein heavy chain domain // Dynein heavy chain, domain-2 // Dynein heavy chain, P-loop containing D4 domain // Dynein heavy chain, coiled coil stalk // Dynein heavy chain // P-loop containing nucleoside triphosphate hydrolase; Axonemal inner arm dynein heavy chain, dynein c (monomeric) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGGACTGGCGAAGCGATCATAGTGCAGCGGCCAAAGCCCCGCCGTCCG
Internal bar code:ATAGCCTTGCAAACTCGGACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:442
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTCAGCTCCGAGAACAGC
Suggested primer 2:GACCCCCTCACCACTAGGAT