Insertion junction: CLIP2.008593_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008593
Chromosome:chromosome 3
Location:2499224
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g159350 (1 of 1) IPR001680//IPR011044//IPR011047//IPR015943//IPR017986//IPR027417 - WD40 repeat // Quinoprotein amine dehydrogenase, beta chain-like // Quinonprotein alcohol dehydrogenase-like superfamily // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATAACGGTGCGCAGAACTTGTCAAAGTGGCTATCCTGACATCTGAAGCA
Internal bar code:CTGTTGTAGTTGGCCGCGGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1609
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GACTTGCTGCGTTGGCTTG
Suggested primer 2:TAGACTTCATACGCCGCACC