Insertion junction: CLIP2.008615_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008615
Chromosome:chromosome 12
Location:5887014
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533500 (1 of 7) PF00211//PF13416 - Adenylate and Guanylate cyclase catalytic domain (Guanylate_cyc) // Bacterial extracellular solute-binding protein (SBP_bac_8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGCCAGTAGACCGCTGCTACCTCCACGCCTACACTGCACCCACGGTC
Internal bar code:TTAGTGGATCGTAAATCTGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:115
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCAGCATCCTCTCCTAC
Suggested primer 2:AGAAGGCCCAGGAGGATAGG