Insertion junction: CLIP2.008624_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008624
Chromosome:chromosome 8
Location:323939
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358572 (1 of 5) PF03094 - Mlo family (Mlo) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCACGAACGGCTTCATTACCCCCCCCCCCCTTGGGACCAATTTGGCTC
Internal bar code:GTTCAGGGACATTAAAGATTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:913
LEAP-Seq percent confirming:52.381
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTTATGTCCTGTTGGGGC
Suggested primer 2:TCAGGATTTGTTGCGTCGGA