Insertion junction: CLIP2.008625_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008625
Chromosome:chromosome 6
Location:4688696
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278800 (1 of 1) PTHR11266:SF40 - MPV17/PMP22 FAMILY PROTEIN 3'UTR
Cre06.g278850 MND1 GAJ-like protein; (1 of 1) PF03962 - Mnd1 family (Mnd1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAAGAGAGATGGGAGCACATCACGACTGGGGCTCCTGAAGAAGTCGCTG
Internal bar code:GTTGGCCTGTTTAGGAGGGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1931
LEAP-Seq percent confirming:17.6471
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:56
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGGAACTCTGACTTGCGG
Suggested primer 2:CGTCAGTTCTTACGCATGCG