Insertion junction: CLIP2.008629_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.008629
Chromosome:chromosome 11
Location:3843763
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g479450 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTAGCTGATGCCGCCGGCGGGTCTCCGGGTTTGGATATGGACTGCAGCT
Internal bar code:CATGAGTTGGCCGCTTTGATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2221
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGGAAAACACGTGGGCAG
Suggested primer 2:ACAGATGTAGGCGGCTATGC