Insertion junction: CLIP2.008644_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.008644
Chromosome:chromosome 17
Location:5647819
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g740100 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCGAGCCTGCGGCCACTCCCGATATTGTTGTTATCAACGGCCGCAGCG
Internal bar code:CCCAAGAATCTTTTGCATCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2535
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGTGACGCTGTGTAACT
Suggested primer 2:AACTGATACACCTGCCCAGC