Insertion junction: CLIP2.008650_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008650
Chromosome:chromosome 13
Location:3771720
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588800 (1 of 83) IPR029044 - Nucleotide-diphospho-sugar transferases CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCATGGCTGAGGGAGGCAACACAGTCGGCACGGCGCCAGCTAAGGAG
Internal bar code:GCTCGGCGCTCACAAAATAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:321
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TAGTCGGCTGTGTGGTGTTC
Suggested primer 2:ATCTCTACGGCATGCAGAGC