Insertion junction: CLIP2.008652_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.008652
Chromosome:chromosome 16
Location:5780484
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680300 (1 of 4) 2.3.1.43 - Phosphatidylcholine--sterol O-acyltransferase / Phospholipid--cholesterol acyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGAAGGTGCAGCCGTTCAGGTGGCCAGTACGGTATCGATGATGGGGAC
Internal bar code:TAGGCTAGCTAGAAAGGGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:474
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGTGCTCGAAGGAGATT
Suggested primer 2:GGCGTGTGTAAAGGACAGGA