Insertion junction: CLIP2.008656_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.008656
Chromosome:chromosome 17
Location:1976774
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g710351 (1 of 10) PTHR12270//PTHR12270:SF6 - GLYCOSYLTRANSFERASE-RELATED // GLYCOSYLTRANSFERASE-LIKE PROTEIN LARGE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCAACCGCCTGCAGCAGCTCCGAGCCATGTGAGCAGTGCGGGGGGCT
Internal bar code:GGCGGCAAACGTCTCATGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:317
LEAP-Seq percent confirming:4.7619
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTCAAGCTCACTACCGCC
Suggested primer 2:TTGGAGGCTTCAGCAGTCAG