Insertion junction: CLIP2.008656_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008656
Chromosome:chromosome 17
Location:1976779
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g710351 (1 of 10) PTHR12270//PTHR12270:SF6 - GLYCOSYLTRANSFERASE-RELATED // GLYCOSYLTRANSFERASE-LIKE PROTEIN LARGE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAGACAGCTGTGTGGCGACGGTCAGCGGAATGGAGGACCGCCGGCAGG
Internal bar code:GTTACTTAAGGTGGAGGCGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3010
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGAGGCTTCAGCAGTCAG
Suggested primer 2:ACTTCAAGCTCACTACCGCC