Insertion junction: CLIP2.008671_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008671
Chromosome:chromosome 7
Location:2382439
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g328550 VPS18 Subunit of the VPS-C complex; (1 of 1) PF05131 - Pep3/Vps18/deep orange family (Pep3_Vps18) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCTCCGCCTCACGCCCCCCCTCCCACTAATCATGAGTGAAACCCCTC
Internal bar code:TATCATCACTGGAAGACCTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:333
LEAP-Seq percent confirming:13.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AAACCAACGAAAACGAGCGG
Suggested primer 2:CGTGTGATAGACGGTACCGG