Insertion junction: CLIP2.008680_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008680
Chromosome:chromosome 17
Location:623755
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g700050 (1 of 6) PF03547 - Membrane transport protein (Mem_trans) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTGGCCACGTCTCTTCTCACGTGGTGCCCGCCTGTGCTGAGAGCATGC
Internal bar code:GTGCCTGAATATGCGTACGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2132
LEAP-Seq percent confirming:89.3939
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:CAACTTGCCTTGCCACTGTC
Suggested primer 2:TGTCGCTAGTCAGGTGGGTA