Insertion junction: CLIP2.008699_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.008699
Chromosome:chromosome 13
Location:81341
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g562400 ABI3 ABI3/VP1 family transcription factor; (1 of 2) PTHR31140//PTHR31140:SF1 - FAMILY NOT NAMED // B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGGTGGGCACGGCGCCTGCCCTGCCTCGGCTGACCCATGCCCTGCCT
Internal bar code:GTTTAGGCGAGGTACGAGTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2545
LEAP-Seq percent confirming:98.1132
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:TACACTTGTAGCAGCTGCCC
Suggested primer 2:AGGCCGACATGGTGAAGAAG